Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen assimilation regulatory protein nac | C9309_16535 | Not Available | Negative | 3370779 - 3371696 | 32823.0 |
| Trna-asn | Not Available | Not Available | Positive | 3372022 - 3372097 | Not Available |
| l,d-transpeptidase | C9309_16545 | Not Available | Negative | 3372141 - 3373088 | 35101.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | C9309_16550 | Not Available | Negative | 3373150 - 3374229 | 36917.2 |
| adenosylcobinamide-gdp ribazoletransferase | C9309_16555 | Not Available | Negative | 3374241 - 3374984 | 26397.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | C9309_16560 | Not Available | Negative | 3374981 - 3375526 | 20102.1 |
| hypothetical protein | C9309_16575 | Not Available | Positive | 3376909 - 3377091 | 7096.7 |
| is30-like element is30 family transposase | C9309_16585 | Not Available | Negative | 3377489 - 3378640 | 44283.5 |
| hypothetical protein | C9309_16595 | Not Available | Negative | 3379087 - 3379497 | 15325.8 |
| group ii intron reverse transcriptase/maturase | C9309_16600 | Not Available | Positive | 3379806 - 3381314 | 58089.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





