Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin | C9309_16480 | Not Available | Positive | 3359775 - 3359915 | 5027.05 |
| adhesin | C9309_16485 | Not Available | Positive | 3359951 - 3361213 | 43176.6 |
| invasin | C9309_16490 | Not Available | Positive | 3361262 - 3361909 | 22462.0 |
| lipopolysaccharide heptosyltransferase family protein | C9309_16495 | Not Available | Negative | 3362037 - 3363089 | 39484.4 |
| shikimate transporter | C9309_16500 | Not Available | Positive | 3363404 - 3364720 | 47720.2 |
| amp nucleosidase | C9309_16505 | Not Available | Positive | 3364822 - 3366276 | 53997.9 |
| yebc/pmpr family dna-binding transcriptional regulator | C9309_16510 | Not Available | Positive | 3366619 - 3367335 | 25868.5 |
| Trna-asn | Not Available | Not Available | Positive | 3367790 - 3367865 | Not Available |
| toxic metabolite efflux mate transporter yeeo | C9309_16520 | Not Available | Negative | 3367966 - 3369609 | 60092.1 |
| Trna-asn | Not Available | Not Available | Positive | 3369614 - 3369689 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





