Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor-binding protein crl | C9309_16150 | Not Available | Negative | 3287431 - 3287832 | 15656.7 |
| esterase | C9309_16155 | Not Available | Negative | 3287890 - 3289134 | 46953.3 |
| xanthine phosphoribosyltransferase | C9309_16160 | Not Available | Negative | 3289226 - 3289684 | 16971.6 |
| cytosol nonspecific dipeptidase | C9309_16165 | Not Available | Positive | 3289945 - 3291402 | 52948.5 |
| peptide chain release factor h | C9309_16170 | Not Available | Negative | 3291459 - 3292073 | 22906.2 |
| rna ligase rtcb family protein | C9309_16175 | Not Available | Negative | 3292070 - 3293236 | 42560.9 |
| gnat family n-acetyltransferase | C9309_16180 | Not Available | Negative | 3293455 - 3293907 | 17561.2 |
| dna polymerase iv | C9309_16185 | Not Available | Negative | 3293904 - 3294959 | 39491.2 |
| putative lateral flagellar export/assembly protein lafu | C9309_16190 | Not Available | Negative | 3295030 - 3295953 | 34249.4 |
| flagellar motor stator protein mota | C9309_16195 | Not Available | Negative | 3295956 - 3296819 | 31242.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





