Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | C9309_16045 | Not Available | Negative | 3271495 - 3272571 | 41372.4 |
| excisionase | C9309_16050 | Not Available | Negative | 3272537 - 3272818 | 10776.8 |
| duf1187 family protein | C9309_16055 | Not Available | Negative | 3272925 - 3273113 | 7030.53 |
| restriction alleviation and modification enhancement protein | C9309_16060 | Not Available | Negative | 3273106 - 3273300 | 7020.23 |
| recombination protein rect | C9309_16065 | Not Available | Negative | 3273357 - 3274166 | 29764.8 |
| exonuclease viii | C9309_16070 | Not Available | Negative | 3274159 - 3275402 | 46342.7 |
| phage capsid protein | C9309_16075 | Not Available | Negative | 3275504 - 3276532 | 37912.7 |
| hypothetical protein | C9309_16080 | Not Available | Negative | 3276551 - 3276913 | 12835.3 |
| hypothetical protein | C9309_16085 | Not Available | Negative | 3276910 - 3277122 | 8069.88 |
| hypothetical protein | C9309_16090 | Not Available | Negative | 3277472 - 3277807 | 13056.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





