Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein | C9309_15890 | Not Available | Negative | 3237595 - 3237705 | 3930.65 |
| glycosyl hydrolase | C9309_15900 | Not Available | Negative | 3240274 - 3242142 | 71570.4 |
| trmb family transcriptional regulator | C9309_15905 | Not Available | Negative | 3242231 - 3243040 | 31508.6 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | C9309_15910 | Not Available | Negative | 3243447 - 3244574 | 42480.6 |
| glycosidase | C9309_15915 | Not Available | Negative | 3244657 - 3245145 | 17535.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C9309_15920 | Not Available | Negative | 3245236 - 3246192 | 34655.8 |
| porin | C9309_15925 | Not Available | Negative | 3246211 - 3247248 | 40487.5 |
| maltose abc transporter substrate-binding protein | C9309_15930 | Not Available | Positive | 3247521 - 3248753 | 45438.4 |
| sugar abc transporter permease | C9309_15935 | Not Available | Positive | 3248777 - 3250045 | 47593.5 |
| sugar abc transporter permease | C9309_15940 | Not Available | Positive | 3250048 - 3250881 | 31055.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





