Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | C9309_15835 | Not Available | Positive | 3226454 - 3228232 | 66073.0 |
| xanthine dehydrogenase iron-sulfur-binding subunit | C9309_15840 | Not Available | Negative | 3228272 - 3228751 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | C9309_15845 | Not Available | Negative | 3228748 - 3229626 | 31558.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | C9309_15850 | Not Available | Negative | 3229637 - 3231934 | 82663.0 |
| lysm peptidoglycan-binding domain-containing protein | C9309_15855 | Not Available | Positive | 3232349 - 3233104 | 26540.0 |
| Trna-gly | Not Available | Not Available | Positive | 3233183 - 3233256 | Not Available |
| site-specific integrase | C9309_15865 | Not Available | Positive | 3233391 - 3234998 | 60162.7 |
| duf4145 domain-containing protein | C9309_15870 | Not Available | Positive | 3234991 - 3235650 | 24680.4 |
| rha family transcriptional regulator | C9309_15880 | Not Available | Positive | 3236559 - 3237287 | 27577.3 |
| hypothetical protein | C9309_15885 | Not Available | Positive | 3237289 - 3237489 | 7721.43 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





