Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | C9309_15265 | Not Available | Positive | 3115366 - 3116433 | 38790.5 |
| abc transporter atp-binding protein/permease | C9309_15270 | Not Available | Positive | 3116430 - 3119165 | 100763.0 |
| inner membrane transport permease yhhj | C9309_15275 | Not Available | Positive | 3119165 - 3120289 | 41050.2 |
| isas1 family transposase | C9309_15280 | Not Available | Negative | 3120454 - 3120569 | 4067.05 |
| hypothetical protein | C9309_15285 | Not Available | Positive | 3120570 - 3120730 | 5816.06 |
| toxin cbta | C9309_15290 | Not Available | Positive | 3120819 - 3121193 | 13899.7 |
| hypothetical protein | C9309_15295 | Not Available | Positive | 3121190 - 3121384 | 6959.16 |
| duf957 domain-containing protein | C9309_15300 | Not Available | Positive | 3121397 - 3121510 | 4241.28 |
| ethanolamine utilization protein | C9309_15310 | Not Available | Positive | 3121999 - 3122181 | 6419.74 |
| duf496 family protein | C9309_15315 | Not Available | Negative | 3122282 - 3122611 | 12778.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





