Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | C9309_14955 | Not Available | Negative | 3058233 - 3058427 | 7604.22 |
| sos response-associated peptidase | C9309_14960 | Not Available | Negative | 3058708 - 3059376 | 25009.5 |
| sira-like protein | C9309_14965 | Not Available | Negative | 3059483 - 3059716 | 8639.5 |
| yeee/yede family protein | C9309_14970 | Not Available | Negative | 3059713 - 3060918 | 44461.5 |
| lipoprotein | C9309_14975 | Not Available | Positive | 3061105 - 3061518 | 15032.1 |
| alpha-amylase | C9309_14980 | Not Available | Negative | 3061552 - 3063039 | 56589.2 |
| flagellar protein flit | C9309_14985 | Not Available | Negative | 3063117 - 3063482 | 13843.7 |
| flagella export chaperone flis | C9309_14990 | Not Available | Negative | 3063482 - 3063892 | 14995.0 |
| flagellar filament capping protein flid | C9309_14995 | Not Available | Negative | 3063907 - 3065319 | 50435.1 |
| flagellin flic | C9309_15000 | Not Available | Positive | 3065574 - 3067037 | 50953.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





