Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing system protein lolc | C9309_14750 | Not Available | Positive | 3027259 - 3028458 | 43266.5 |
| lipoprotein-releasing abc transporter atp-binding protein lold | C9309_14755 | Not Available | Positive | 3028451 - 3029152 | 25439.9 |
| lipoprotein-releasing abc transporter permease subunit lole | C9309_14760 | Not Available | Positive | 3029152 - 3030396 | 45347.0 |
| n-acetylglucosamine kinase | C9309_14765 | Not Available | Positive | 3030425 - 3031336 | 33044.6 |
| nad-dependent deacylase | C9309_14770 | Not Available | Positive | 3031352 - 3032173 | 30938.2 |
| tpm domain-containing protein | C9309_14775 | Not Available | Negative | 3032312 - 3033100 | 28906.7 |
| duf3592 domain-containing protein | C9309_14780 | Not Available | Negative | 3033097 - 3033558 | 17258.4 |
| spermidine/putrescine-binding periplasmic protein | C9309_14785 | Not Available | Negative | 3033616 - 3034662 | 38869.1 |
| spermidine/putrescine abc transporter permease potc | C9309_14790 | Not Available | Negative | 3034659 - 3035453 | 29139.8 |
| hypothetical protein | C9309_14795 | Not Available | Positive | 3035762 - 3035965 | 7076.74 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





