Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine ribonucleoside efflux pump nepi | C9309_14550 | Not Available | Positive | 2986590 - 2987780 | 41874.6 |
| hypothetical protein | C9309_14555 | Not Available | Negative | 2987821 - 2988114 | 11051.3 |
| lipoprotein 28 | C9309_14560 | Not Available | Positive | 2988336 - 2989154 | 29425.3 |
| dmt family transporter | C9309_14565 | Not Available | Negative | 2989158 - 2990081 | 33129.5 |
| sugar efflux transporter | C9309_14570 | Not Available | Negative | 2990192 - 2991376 | 43556.1 |
| cytoplasmic protein | C9309_14575 | Not Available | Negative | 2991763 - 2991903 | 5374.7 |
| attp region and p4int integrase | C9309_14580 | Not Available | Negative | 2992157 - 2992303 | 5621.72 |
| dna primase | C9309_14585 | Not Available | Negative | 2992517 - 2994553 | 74372.6 |
| ribonuclease e | C9309_14590 | Not Available | Negative | 2994554 - 2996181 | 60905.9 |
| duf2655 domain-containing protein | C9309_14595 | Not Available | Positive | 2996316 - 2996636 | 12100.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





