Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iib | C9309_14445 | Not Available | Positive | 2964469 - 2966085 | 58349.2 |
| arac family transcriptional regulator | C9309_14455 | Not Available | Negative | 2966896 - 2967789 | 33959.8 |
| solute:sodium symporter family transporter | C9309_14460 | Not Available | Positive | 2967956 - 2969671 | 62130.8 |
| duf4976 domain-containing protein | C9309_14465 | Not Available | Positive | 2969668 - 2971161 | 57211.3 |
| hypothetical protein | C9309_14470 | Not Available | Negative | 2971208 - 2971657 | 15730.8 |
| duf202 domain-containing protein | C9309_14475 | Not Available | Positive | 2971767 - 2972114 | 12780.1 |
| duf202 domain-containing protein | C9309_14480 | Not Available | Positive | 2972104 - 2972466 | 13769.1 |
| radical sam protein | C9309_14485 | Not Available | Positive | 2972463 - 2972960 | 19242.0 |
| multidrug efflux mfs transporter emrd | C9309_14490 | Not Available | Negative | 2972968 - 2974152 | 42218.5 |
| type i toxin-antitoxin system toxin tisb | C9309_14495 | Not Available | Negative | 2974571 - 2974660 | 3195.29 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





