Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | C9309_14295 | Not Available | Negative | 2935705 - 2936049 | 12493.9 |
| atp-dependent dna helicase | C9309_14300 | Not Available | Positive | 2936181 - 2938091 | 70365.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | C9309_14305 | Not Available | Positive | 2938149 - 2938844 | 25229.4 |
| slp family lipoprotein yeay | C9309_14310 | Not Available | Positive | 2938884 - 2939465 | 20922.4 |
| long-chain-fatty-acid--coa ligase | C9309_14315 | Not Available | Positive | 2939670 - 2941355 | 62335.7 |
| ribonuclease d | C9309_14320 | Not Available | Positive | 2941437 - 2942552 | 42184.0 |
| oxidoreductase | C9309_14325 | Not Available | Negative | 2942606 - 2943571 | 35706.2 |
| ring-hydroxylating oxygenase subunit alpha | C9309_14330 | Not Available | Negative | 2943627 - 2944751 | 42589.1 |
| bcct family transporter yeav | C9309_14335 | Not Available | Negative | 2944783 - 2946393 | 58673.4 |
| malate dehydrogenase | C9309_14340 | Not Available | Negative | 2946644 - 2947729 | 40317.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





