Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C9309_13930 | Not Available | Positive | 2862114 - 2863379 | 46036.9 |
| quinate/shikimate dehydrogenase | C9309_13935 | Not Available | Positive | 2863391 - 2864257 | 31243.7 |
| 3-dehydroquinase | C9309_13940 | Not Available | Positive | 2864288 - 2865046 | 27551.4 |
| acyl-coa dehydrogenase | C9309_13950 | Not Available | Positive | 2866798 - 2867949 | 43004.6 |
| arac family transcriptional regulator | C9309_13955 | Not Available | Negative | 2867992 - 2868903 | 34896.2 |
| electron transfer flavoprotein | C9309_13960 | Not Available | Positive | 2869219 - 2869983 | 27472.0 |
| electron transfer flavoprotein subunit alpha | C9309_13965 | Not Available | Positive | 2870003 - 2870941 | 33829.7 |
| fad-dependent oxidoreductase | C9309_13970 | Not Available | Positive | 2870997 - 2872286 | 46015.9 |
| ferredoxin family protein | C9309_13975 | Not Available | Positive | 2872283 - 2872576 | 10685.7 |
| cyclohexanecarboxylate-coa ligase | C9309_13980 | Not Available | Positive | 2872579 - 2874279 | 62769.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





