Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose/proton symporter rhat | C9309_13775 | Not Available | Negative | 2833232 - 2834266 | 37177.0 |
| superoxide dismutase | C9309_13780 | Not Available | Positive | 2834551 - 2835171 | 23080.2 |
| 2-keto-3-deoxygluconate permease | C9309_13785 | Not Available | Positive | 2835431 - 2836414 | 33671.4 |
| 6-n-hydroxylaminopurine resistance protein | C9309_13790 | Not Available | Positive | 2836563 - 2837237 | 25346.1 |
| two-component sensor histidine kinase | C9309_13795 | Not Available | Negative | 2837379 - 2838752 | 51627.3 |
| dna-binding response regulator | C9309_13800 | Not Available | Negative | 2838749 - 2839447 | 26313.7 |
| periplasmic protein cpxp | C9309_13805 | Not Available | Positive | 2839597 - 2840097 | 18966.4 |
| cation-efflux pump fief | C9309_13810 | Not Available | Positive | 2840246 - 2841148 | 32929.2 |
| atp-dependent 6-phosphofructokinase | C9309_13815 | Not Available | Positive | 2841329 - 2842291 | 34844.2 |
| sulfate abc transporter substrate-binding protein | C9309_13820 | Not Available | Positive | 2842610 - 2843599 | 36716.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





