Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i oxidase subunit cydx | C9309_13360 | Not Available | Positive | 2756834 - 2756947 | 4041.9 |
| cyd operon protein ybge | C9309_13365 | Not Available | Positive | 2756947 - 2757240 | 10933.0 |
| acyl-coa thioester hydrolase ybgc | C9309_13370 | Not Available | Positive | 2757390 - 2757794 | 15562.9 |
| protein tolq | C9309_13375 | Not Available | Positive | 2757791 - 2758483 | 25599.2 |
| protein tolr | C9309_13380 | Not Available | Positive | 2758487 - 2758915 | 15397.9 |
| cell envelope integrity protein tola | C9309_13385 | Not Available | Positive | 2758980 - 2760245 | 43216.7 |
| protein tolb | C9309_13390 | Not Available | Positive | 2760378 - 2761670 | 45958.1 |
| peptidoglycan-associated lipoprotein | C9309_13395 | Not Available | Positive | 2761705 - 2762226 | 18825.3 |
| cell division protein cpob | C9309_13400 | Not Available | Positive | 2762236 - 2763027 | 28263.9 |
| Trna-lys | Not Available | Not Available | Positive | 2763192 - 2763267 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





