Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur subunit | C9309_13310 | Not Available | Positive | 2740508 - 2741224 | 26771.4 |
| 2-oxoglutarate dehydrogenase e1 component | C9309_13315 | Not Available | Positive | 2741525 - 2744326 | 105068.0 |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | C9309_13320 | Not Available | Positive | 2744341 - 2745558 | 44014.0 |
| succinyl-coa ligase subunit beta | C9309_13325 | Not Available | Positive | 2745652 - 2746818 | 41395.1 |
| succinyl-coa ligase subunit alpha | C9309_13330 | Not Available | Positive | 2746818 - 2747687 | 29779.3 |
| gntr family transcriptional regulator | C9309_13335 | Not Available | Negative | 2747791 - 2748513 | 28248.9 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | C9309_13340 | Not Available | Positive | 2748622 - 2750598 | 69642.0 |
| mannosylglycerate hydrolase | C9309_13345 | Not Available | Positive | 2750616 - 2753249 | 100212.0 |
| cytochrome bd-i ubiquinol oxidase subunit 1 | C9309_13350 | Not Available | Positive | 2754096 - 2755664 | 58208.4 |
| cytochrome bd-i ubiquinol oxidase subunit 2 | C9309_13355 | Not Available | Positive | 2755680 - 2756819 | 42455.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





