Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01666 family membrane protein | C9309_13050 | Not Available | Positive | 2681649 - 2683811 | 82022.8 |
| protein sxy | C9309_13055 | Not Available | Negative | 2683774 - 2684403 | 24148.3 |
| cell division inhibitor sula | C9309_13060 | Not Available | Positive | 2684622 - 2685131 | 18802.5 |
| porin ompa | C9309_13065 | Not Available | Positive | 2685488 - 2686528 | 37202.8 |
| macrodomain ter protein matp | C9309_13070 | Not Available | Negative | 2686603 - 2687055 | 17694.4 |
| lon protease family protein | C9309_13075 | Not Available | Positive | 2687241 - 2689001 | 65824.3 |
| beta-hydroxydecanoyl-acp dehydratase | C9309_13080 | Not Available | Positive | 2689070 - 2689588 | 18970.2 |
| ribosome modulation factor | C9309_13085 | Not Available | Negative | 2689658 - 2689825 | 6507.88 |
| membrane integrity-associated transporter subunit pqic | C9309_13090 | Not Available | Negative | 2690081 - 2690644 | 20637.5 |
| paraquat-inducible protein b | C9309_13095 | Not Available | Negative | 2690641 - 2692281 | 60524.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





