Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee export apparatus protein escr | C9309_12775 | Not Available | Positive | 2626754 - 2627407 | 24398.0 |
| type iii secretion system lee export apparatus protein escs | C9309_12780 | Not Available | Positive | 2627407 - 2627676 | 9887.55 |
| type iii secretion system lee export apparatus protein esct | C9309_12785 | Not Available | Positive | 2627676 - 2628452 | 28731.0 |
| type iii secretion system lee export apparatus switch protein escu | C9309_12790 | Not Available | Positive | 2628445 - 2629482 | 39314.5 |
| type iii secretion system lee muramidase etga | C9309_12795 | Not Available | Negative | 2629479 - 2629937 | 17039.5 |
| negative regulator grlr | C9309_12800 | Not Available | Positive | 2630134 - 2630490 | 13313.0 |
| type iii secretion system lee transcriptional regulator grla | C9309_12805 | Not Available | Positive | 2630565 - 2630978 | 16081.5 |
| type iii secretion system lee chaperone cesd | C9309_12810 | Not Available | Negative | 2631364 - 2631819 | 17486.7 |
| type iii secretion system lee outer membrane ring protein escc | C9309_12815 | Not Available | Negative | 2631833 - 2633371 | 56576.5 |
| sepd | C9309_12820 | Not Available | Negative | 2633371 - 2633826 | 17536.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





