Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | C9309_12370 | Not Available | Negative | 2561836 - 2562657 | 30472.2 |
| mfs transporter | C9309_12375 | Not Available | Positive | 2562754 - 2563935 | 41264.9 |
| duf488 domain-containing protein | C9309_12380 | Not Available | Positive | 2563990 - 2564337 | 13340.9 |
| duf333 domain-containing protein | C9309_12385 | Not Available | Negative | 2564359 - 2564613 | 8904.77 |
| diguanylate cyclase | C9309_12390 | Not Available | Positive | 2564796 - 2565821 | 38495.7 |
| hypothetical protein | C9309_12395 | Not Available | Positive | 2565854 - 2565952 | 3458.45 |
| protein yoaj | C9309_12400 | Not Available | Positive | 2565955 - 2566029 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | C9309_12405 | Not Available | Negative | 2566088 - 2566336 | 8671.14 |
| transposase | C9309_12410 | Not Available | Negative | 2566564 - 2566820 | 8807.54 |
| is200/is605 family transposase | C9309_12415 | Not Available | Positive | 2566821 - 2567070 | 9455.45 |
Pathways
830 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





