Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1266 domain-containing protein | C9309_12270 | Not Available | Negative | 2539922 - 2540962 | 40393.3 |
| dna topoisomerase iii | C9309_12275 | Not Available | Negative | 2541090 - 2543051 | 73210.8 |
| selenide, water dikinase seld | C9309_12280 | Not Available | Negative | 2543056 - 2544099 | 36686.4 |
| nad(p)h nitroreductase | C9309_12285 | Not Available | Negative | 2544216 - 2544767 | 20060.1 |
| signal peptide peptidase sppa | C9309_12290 | Not Available | Positive | 2544928 - 2546784 | 67204.9 |
| l-asparaginase 1 | C9309_12295 | Not Available | Positive | 2546951 - 2547967 | 37129.5 |
| bifunctional nicotinamidase/pyrazinamidase | C9309_12300 | Not Available | Positive | 2547978 - 2548619 | 23380.3 |
| duf1315 family protein | C9309_12305 | Not Available | Negative | 2548780 - 2549052 | 10296.5 |
| peptide-methionine (r)-s-oxide reductase | C9309_12310 | Not Available | Negative | 2549094 - 2549507 | 15453.0 |
| glyceraldehyde-3-phosphate dehydrogenase | C9309_12315 | Not Available | Positive | 2549849 - 2550844 | 35534.5 |
Pathways
858 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





