Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C9309_12010 | Not Available | Positive | 2491187 - 2491744 | 20092.8 |
| aldehyde dehydrogenase puuc | C9309_12015 | Not Available | Positive | 2492019 - 2493506 | 53448.5 |
| fad-binding oxidoreductase | C9309_12020 | Not Available | Positive | 2493508 - 2494788 | 47158.2 |
| 4-aminobutyrate transaminase | C9309_12025 | Not Available | Positive | 2494826 - 2496091 | 44703.6 |
| phage shock protein operon transcriptional activator | C9309_12030 | Not Available | Negative | 2496211 - 2497188 | 36962.6 |
| phage shock protein a | C9309_12035 | Not Available | Positive | 2497355 - 2498023 | 25494.4 |
| envelope stress response membrane protein pspb | C9309_12040 | Not Available | Positive | 2498077 - 2498301 | 8763.59 |
| envelope stress response membrane protein pspc | C9309_12045 | Not Available | Positive | 2498301 - 2498660 | 13489.6 |
| phage shock protein d | C9309_12050 | Not Available | Positive | 2498669 - 2498890 | 8042.22 |
| thiosulfate sulfurtransferase pspe | C9309_12055 | Not Available | Positive | 2498965 - 2499279 | 11476.0 |
Pathways
561 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





