Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator cysb | C9309_11860 | Not Available | Positive | 2463132 - 2464106 | 36152.5 |
| ymia family putative membrane protein | C9309_11865 | Not Available | Positive | 2464437 - 2464565 | 4866.05 |
| hypothetical protein | C9309_11870 | Not Available | Positive | 2464568 - 2464735 | 6338.19 |
| hypothetical protein | C9309_11875 | Not Available | Positive | 2464849 - 2464944 | 3822.77 |
| aconitate hydratase acna | C9309_11880 | Not Available | Positive | 2465108 - 2467783 | 97708.9 |
| gtp cyclohydrolase ii | C9309_11885 | Not Available | Negative | 2467847 - 2468437 | 21837.3 |
| phosphatidylglycerophosphatase b | C9309_11890 | Not Available | Positive | 2468607 - 2469371 | 29022.8 |
| lps assembly protein a | C9309_11895 | Not Available | Positive | 2469520 - 2469828 | 11352.1 |
| lps assembly protein b | C9309_11900 | Not Available | Positive | 2469835 - 2471004 | 44533.6 |
| orotidine-5'-phosphate decarboxylase | C9309_11905 | Not Available | Positive | 2471196 - 2471933 | 26367.8 |
Pathways
636 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





