Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2574 family protein | C9309_11660 | Not Available | Positive | 2423062 - 2423343 | 10164.1 |
| type 1 fimbrial protein | C9309_11665 | Not Available | Positive | 2423636 - 2424178 | 19075.6 |
| fimbrial assembly protein | C9309_11670 | Not Available | Positive | 2424258 - 2424932 | 24864.4 |
| fimbrial biogenesis outer membrane usher protein | C9309_11675 | Not Available | Positive | 2424948 - 2427428 | 92324.0 |
| putative fimbrial-like adhesin protein | C9309_11680 | Not Available | Positive | 2427444 - 2428478 | 36973.0 |
| nickel/cobalt homeostasis protein rcnb | C9309_11685 | Not Available | Negative | 2428560 - 2428898 | 12466.8 |
| nickel/cobalt efflux protein rcna | C9309_11690 | Not Available | Negative | 2429117 - 2429941 | 30455.3 |
| transcriptional regulator | C9309_11695 | Not Available | Positive | 2430062 - 2430334 | 10134.5 |
| hydroxyethylthiazole kinase | C9309_11700 | Not Available | Positive | 2430557 - 2431345 | 27364.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | C9309_11705 | Not Available | Positive | 2431342 - 2432142 | 28635.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





