Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | C9309_11190 | Not Available | Positive | 2320019 - 2321458 | 52197.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | C9309_11195 | Not Available | Negative | 2321500 - 2322501 | 35766.7 |
| cytochrome b561 | C9309_11200 | Not Available | Positive | 2322690 - 2323220 | 20273.6 |
| hypothetical protein | C9309_11205 | Not Available | Positive | 2323465 - 2323638 | 5860.19 |
| protein hokb | C9309_11210 | Not Available | Negative | 2323710 - 2323859 | 5626.16 |
| hamp domain-containing protein | C9309_11220 | Not Available | Positive | 2324258 - 2325898 | 58911.3 |
| lysr family transcriptional regulator | C9309_11225 | Not Available | Negative | 2325936 - 2326859 | 33375.5 |
| voc family protein | C9309_11230 | Not Available | Positive | 2327076 - 2328419 | 51014.6 |
| glucan biosynthesis protein d | C9309_11235 | Not Available | Positive | 2328644 - 2330299 | 62771.2 |
| duf465 domain-containing protein | C9309_11240 | Not Available | Positive | 2330439 - 2330663 | 8878.79 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





