Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein paay | C9309_11140 | Not Available | Positive | 2305189 - 2305779 | 21441.0 |
| oxidoreductase | C9309_11145 | Not Available | Positive | 2306010 - 2306870 | 30707.8 |
| duf2773 domain-containing bactofilin | C9309_11150 | Not Available | Positive | 2306934 - 2309240 | 86701.2 |
| cdp-alcohol phosphatidyltransferase family protein | C9309_11155 | Not Available | Positive | 2309411 - 2310016 | 22614.6 |
| hypothetical protein | C9309_11160 | Not Available | Positive | 2310016 - 2310912 | 33262.9 |
| alpha/beta fold hydrolase | C9309_11165 | Not Available | Positive | 2310928 - 2312685 | 65491.4 |
| hypothetical protein | C9309_11170 | Not Available | Positive | 2312675 - 2313991 | 50579.6 |
| fmn-dependent nadh-azoreductase | C9309_11175 | Not Available | Negative | 2314042 - 2314647 | 21671.0 |
| atp-dependent rna helicase hrpa | C9309_11180 | Not Available | Positive | 2314848 - 2318750 | 149008.0 |
| ydcf family protein | C9309_11185 | Not Available | Positive | 2319022 - 2319822 | 29707.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





