Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-succinyltransferase | C9309_10990 | Not Available | Negative | 2272403 - 2273332 | 35701.2 |
| acetyltransferase | C9309_10995 | Not Available | Positive | 2273489 - 2273932 | 16493.7 |
| duf1076 domain-containing protein | C9309_11000 | Not Available | Positive | 2274103 - 2274239 | 5022.06 |
| duf1076 domain-containing protein | C9309_11005 | Not Available | Positive | 2274321 - 2274962 | 24098.2 |
| capsid protein | C9309_11010 | Not Available | Positive | 2274993 - 2275160 | 6150.79 |
| universal stress protein uspf | C9309_11015 | Not Available | Negative | 2275903 - 2276337 | 15959.4 |
| porin ompn | C9309_11020 | Not Available | Negative | 2276478 - 2277611 | 41207.9 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | C9309_11025 | Not Available | Negative | 2277978 - 2281502 | 128847.0 |
| duf333 domain-containing protein | C9309_11030 | Not Available | Positive | 2281776 - 2282042 | 8696.44 |
| heat-shock protein hslj | C9309_11035 | Not Available | Negative | 2282039 - 2282461 | 15180.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





