Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 5 | C9309_10620 | Not Available | Negative | 2196339 - 2198048 | 64970.1 |
| formate hydrogenlyase subunit 4 | C9309_10625 | Not Available | Negative | 2198066 - 2198989 | 33031.4 |
| formate hydrogenlyase subunit 3 | C9309_10630 | Not Available | Negative | 2198992 - 2200818 | 64212.3 |
| formate hydrogenlyase subunit 2 | C9309_10635 | Not Available | Negative | 2200815 - 2201426 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | C9309_10640 | Not Available | Negative | 2201551 - 2202012 | 17627.9 |
| hypothetical protein | C9309_10645 | Not Available | Negative | 2202100 - 2202318 | 8011.78 |
| protein hypa | C9309_10650 | Not Available | Positive | 2202224 - 2202574 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | C9309_10655 | Not Available | Positive | 2202578 - 2203450 | 31566.8 |
| hydrogenase assembly protein hypc | C9309_10660 | Not Available | Positive | 2203441 - 2203713 | 9732.58 |
| hydrogenase formation protein hypd | C9309_10665 | Not Available | Positive | 2203713 - 2204834 | 41366.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





