Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | C9309_10320 | Not Available | Positive | 2138856 - 2142338 | 129967.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | C9309_10325 | Not Available | Positive | 2142351 - 2143310 | 35243.6 |
| lysine decarboxylase ldcc | C9309_10330 | Not Available | Positive | 2143409 - 2145550 | 80610.9 |
| voc family protein | C9309_10335 | Not Available | Positive | 2145607 - 2145996 | 14707.4 |
| trna lysidine(34) synthetase tils | C9309_10340 | Not Available | Positive | 2146061 - 2147359 | 48006.7 |
| rho-binding antiterminator | C9309_10345 | Not Available | Negative | 2147408 - 2147668 | 9698.45 |
| yaep family protein | C9309_10350 | Not Available | Negative | 2147655 - 2147855 | 7214.59 |
| yaeq family protein | C9309_10355 | Not Available | Positive | 2148021 - 2148566 | 20877.7 |
| aminoacyl-trna hydrolase | C9309_10360 | Not Available | Positive | 2148563 - 2148985 | 15577.9 |
| envelope stress response activation lipoprotein nlpe | C9309_10365 | Not Available | Positive | 2148999 - 2149709 | 25885.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





