Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | C9309_10270 | Not Available | Positive | 2128636 - 2129394 | 28300.5 |
| phosphatidate cytidylyltransferase | C9309_10275 | Not Available | Positive | 2129407 - 2130264 | 31455.6 |
| sigma e protease regulator rsep | C9309_10280 | Not Available | Positive | 2130276 - 2131628 | 49074.2 |
| outer membrane protein assembly factor bama | C9309_10285 | Not Available | Positive | 2131658 - 2134090 | 90571.6 |
| chaperone protein skp | C9309_10290 | Not Available | Positive | 2134212 - 2134697 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C9309_10295 | Not Available | Positive | 2134701 - 2135726 | 36040.7 |
| beta-hydroxyacyl-acp dehydratase | C9309_10300 | Not Available | Positive | 2135831 - 2136286 | 17034.0 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | C9309_10305 | Not Available | Positive | 2136290 - 2137078 | 28081.7 |
| lipid-a-disaccharide synthase | C9309_10310 | Not Available | Positive | 2137078 - 2138226 | 42418.0 |
| ribonuclease hii | C9309_10315 | Not Available | Positive | 2138223 - 2138819 | 21527.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





