Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h(+)/cl(-) exchange transporter clca | C9309_10170 | Not Available | Positive | 2108840 - 2110261 | 50282.0 |
| hypothetical protein | C9309_10175 | Not Available | Positive | 2110285 - 2110350 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | C9309_10180 | Not Available | Positive | 2110343 - 2110687 | 12101.2 |
| tric cation channel family protein | C9309_10185 | Not Available | Negative | 2110734 - 2111357 | 22129.1 |
| cobalamin-binding protein | C9309_10190 | Not Available | Negative | 2111395 - 2112195 | 29368.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | C9309_10195 | Not Available | Negative | 2112188 - 2112886 | 24369.5 |
| deoxyguanosinetriphosphate triphosphohydrolase | C9309_10200 | Not Available | Positive | 2112970 - 2114487 | 59358.2 |
| serine endoprotease degp | C9309_10205 | Not Available | Positive | 2114617 - 2116041 | 49313.2 |
| cdar family transcriptional regulator | C9309_10210 | Not Available | Positive | 2116219 - 2117349 | 42619.8 |
| duf3461 family protein | C9309_10215 | Not Available | Negative | 2117438 - 2117824 | 15097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





