Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase/endonuclease cas3 | C9309_09915 | Not Available | Positive | 2056219 - 2058918 | 101932.0 |
| type i-e crispr-associated protein cse1/casa | C9309_09920 | Not Available | Positive | 2059016 - 2060578 | 58937.4 |
| type i-e crispr-associated protein cse2/casb | C9309_09925 | Not Available | Positive | 2060575 - 2061114 | 20747.8 |
| type i-e crispr-associated protein cas7/cse4/casc | C9309_09930 | Not Available | Positive | 2061126 - 2062181 | 38392.6 |
| type i-e crispr-associated protein cas5/casd | C9309_09935 | Not Available | Positive | 2062192 - 2062938 | 28603.1 |
| type i-e crispr-associated protein cas6/cse3/case | C9309_09940 | Not Available | Positive | 2062920 - 2063570 | 24649.5 |
| type i-e crispr-associated endonuclease cas1 | C9309_09945 | Not Available | Positive | 2063567 - 2064487 | 33414.7 |
| type i-e crispr-associated endoribonuclease cas2 | C9309_09950 | Not Available | Positive | 2064487 - 2064780 | 11004.4 |
| aminopeptidase | C9309_09955 | Not Available | Negative | 2065475 - 2066512 | 37913.4 |
| sulfate adenylyltransferase subunit 2 | C9309_09960 | Not Available | Positive | 2066764 - 2067672 | 35190.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





