Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C9309_09760 | Not Available | Positive | 2020905 - 2022257 | 49145.0 |
| glucarate dehydratase-related protein | C9309_09765 | Not Available | Positive | 2022259 - 2023599 | 48940.5 |
| glucarate dehydratase | C9309_09770 | Not Available | Positive | 2023620 - 2024960 | 49143.9 |
| signal transduction histidine kinase | C9309_09775 | Not Available | Negative | 2025192 - 2027948 | 102460.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | C9309_09780 | Not Available | Positive | 2028005 - 2029306 | 48108.2 |
| gtp pyrophosphokinase | C9309_09785 | Not Available | Positive | 2029354 - 2031588 | 83880.4 |
| mazf-maze toxin-antitoxin system antitoxin maze | C9309_09790 | Not Available | Positive | 2031666 - 2031914 | 9356.24 |
| endoribonuclease mazf | C9309_09795 | Not Available | Positive | 2031914 - 2032249 | 12158.8 |
| nucleoside triphosphate pyrophosphohydrolase | C9309_09800 | Not Available | Positive | 2032320 - 2033111 | 30444.0 |
| ctp synthetase | C9309_09805 | Not Available | Positive | 2033339 - 2034976 | 60377.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





