Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | C9309_08530 | Not Available | Positive | 1781157 - 1782674 | 57606.8 |
| hydrogenase-2 operon protein hybg | C9309_08545 | Not Available | Negative | 1783262 - 1783510 | 8808.67 |
| hydrogenase nickel incorporation protein | C9309_08550 | Not Available | Negative | 1783523 - 1783864 | 12698.1 |
| hydrogenase-2 assembly chaperone | C9309_08555 | Not Available | Negative | 1783857 - 1784345 | 17954.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | C9309_08560 | Not Available | Negative | 1784338 - 1784832 | 17781.9 |
| hydrogenase-2 large chain | C9309_08565 | Not Available | Negative | 1784832 - 1786535 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | C9309_08570 | Not Available | Negative | 1786532 - 1787710 | 43604.7 |
| hydrogenase-2 operon protein hyba | C9309_08575 | Not Available | Negative | 1787700 - 1788686 | 36005.0 |
| hydrogenase-2 small chain | C9309_08580 | Not Available | Negative | 1788689 - 1789807 | 39654.3 |
| duf2623 domain-containing protein | C9309_08585 | Not Available | Negative | 1789996 - 1790283 | 10946.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





