Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | C9309_08125 | Not Available | Negative | 1704850 - 1705836 | 36500.9 |
| radical sam family heme chaperone hemw | C9309_08130 | Not Available | Negative | 1706148 - 1707284 | 42551.6 |
| xtp/ditp diphosphatase | C9309_08135 | Not Available | Negative | 1707277 - 1707870 | 20945.9 |
| yggu family protein | C9309_08140 | Not Available | Negative | 1707878 - 1708168 | 10429.8 |
| yggt family protein | C9309_08145 | Not Available | Negative | 1708165 - 1708731 | 21168.5 |
| yggs family pyridoxal phosphate enzyme | C9309_08150 | Not Available | Negative | 1708749 - 1709453 | 25788.9 |
| type iv pilus twitching motility protein pilt | C9309_08155 | Not Available | Positive | 1709471 - 1710451 | 35944.3 |
| holliday junction resolvase ruvx | C9309_08160 | Not Available | Negative | 1710627 - 1711043 | 15187.2 |
| yqge/algh family protein | C9309_08165 | Not Available | Negative | 1711043 - 1711606 | 20687.1 |
| glutathione synthetase | C9309_08170 | Not Available | Negative | 1711715 - 1712665 | 35563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





