Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf421 domain-containing protein | C9309_07310 | Not Available | Negative | 1532648 - 1533340 | 26283.5 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C9309_07315 | Not Available | Positive | 1533470 - 1535230 | 65655.0 |
| formate transporter foca | C9309_07320 | Not Available | Positive | 1535636 - 1536493 | 30992.6 |
| formate acetyltransferase 1 | C9309_07325 | Not Available | Positive | 1536548 - 1538830 | 85362.0 |
| pyruvate formate lyase 1-activating protein | C9309_07330 | Not Available | Positive | 1539022 - 1539762 | 28205.9 |
| nad(p)h oxidoreductase | C9309_07335 | Not Available | Negative | 1539844 - 1540434 | 23013.3 |
| lysr family transcriptional regulator | C9309_07340 | Not Available | Positive | 1540540 - 1541442 | 33900.8 |
| amino acid permease | C9309_07345 | Not Available | Negative | 1541443 - 1542873 | 52473.5 |
| mfs transporter | C9309_07350 | Not Available | Negative | 1543082 - 1544230 | 41462.2 |
| hydrolase | C9309_07355 | Not Available | Positive | 1544545 - 1545171 | 23089.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





