Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0537 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308128 bp
Thymine Count
1310798 bp
Guanine Count
1342120 bp
Cytosine Count
1315529 bp
Genome Length
5291545 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | C9304_14760 | Not Available | Negative | 2981498 - 2982619 | 41366.7 |
| hydrogenase assembly protein hypc | C9304_14765 | Not Available | Negative | 2982619 - 2982891 | 9732.58 |
| hydrogenase nickel incorporation protein hypb | C9304_14770 | Not Available | Negative | 2982882 - 2983754 | 31566.8 |
| protein hypa | C9304_14775 | Not Available | Negative | 2983758 - 2984108 | 13168.9 |
| hypothetical protein | C9304_14780 | Not Available | Positive | 2984014 - 2984232 | 8011.78 |
| formate hydrogenlyase regulatory protein hyca | C9304_14785 | Not Available | Positive | 2984320 - 2984781 | 17627.9 |
| formate hydrogenlyase subunit 2 | C9304_14790 | Not Available | Positive | 2984906 - 2985517 | 21874.4 |
| formate hydrogenlyase subunit 3 | C9304_14795 | Not Available | Positive | 2985514 - 2987340 | 64212.3 |
| formate hydrogenlyase subunit 4 | C9304_14800 | Not Available | Positive | 2987343 - 2988266 | 33031.4 |
| formate hydrogenlyase subunit 5 | C9304_14805 | Not Available | Positive | 2988284 - 2989993 | 64970.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





