Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0537 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308128 bp
Thymine Count
1310798 bp
Guanine Count
1342120 bp
Cytosine Count
1315529 bp
Genome Length
5291545 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(16) synthase dusc | C9304_14395 | Not Available | Positive | 2908195 - 2909145 | 35339.7 |
| protein yohp | C9304_14400 | Not Available | Negative | 2909533 - 2909616 | 3092.28 |
| multidrug resistance outer membrane protein mdtq | C9304_14405 | Not Available | Positive | 2909750 - 2911276 | 55638.3 |
| sdr family oxidoreductase | C9304_14410 | Not Available | Positive | 2911329 - 2912090 | 26979.4 |
| deda family protein | C9304_14415 | Not Available | Negative | 2912220 - 2912798 | 21422.9 |
| yip1 family protein | C9304_14420 | Not Available | Positive | 2912968 - 2913555 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | C9304_14425 | Not Available | Positive | 2913729 - 2914661 | 33855.3 |
| d-lactate dehydrogenase | C9304_14430 | Not Available | Negative | 2914699 - 2916414 | 64679.1 |
| beta-glucosidase bglx | C9304_14435 | Not Available | Positive | 2916610 - 2918907 | 83538.7 |
| abc transporter substrate-binding protein | C9304_14440 | Not Available | Positive | 2919118 - 2920035 | 32543.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





