Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0537 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308128 bp
Thymine Count
1310798 bp
Guanine Count
1342120 bp
Cytosine Count
1315529 bp
Genome Length
5291545 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | C9304_13575 | Not Available | Positive | 2743162 - 2743887 | 25971.9 |
| ribosome recycling factor | C9304_13580 | Not Available | Positive | 2744179 - 2744736 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C9304_13585 | Not Available | Positive | 2744828 - 2746024 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | C9304_13590 | Not Available | Positive | 2746213 - 2746971 | 28300.5 |
| phosphatidate cytidylyltransferase | C9304_13595 | Not Available | Positive | 2746984 - 2747841 | 31455.6 |
| sigma e protease regulator rsep | C9304_13600 | Not Available | Positive | 2747853 - 2749205 | 49074.2 |
| outer membrane protein assembly factor bama | C9304_13605 | Not Available | Positive | 2749235 - 2751667 | 90557.5 |
| chaperone protein skp | C9304_13610 | Not Available | Positive | 2751789 - 2752274 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C9304_13615 | Not Available | Positive | 2752278 - 2753303 | 36040.7 |
| beta-hydroxyacyl-acp dehydratase | C9304_13620 | Not Available | Positive | 2753408 - 2753863 | 17034.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





