Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0527 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290723 bp
Thymine Count
1292403 bp
Guanine Count
1315691 bp
Cytosine Count
1315234 bp
Genome Length
5219416 bp
Protein-coding Genes
4641 genes
Non-Coding Genes
535 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | C9296_23955 | Not Available | Positive | 4765584 - 4766375 | 29263.9 |
| duf21 domain-containing protein | C9296_23960 | Not Available | Positive | 4766441 - 4767682 | 46353.9 |
| nucleotide exchange factor grpe | C9296_23965 | Not Available | Negative | 4767737 - 4768330 | 21857.1 |
| molecular chaperone grpe | C9296_23970 | Not Available | Negative | 4768327 - 4768521 | 7103.64 |
| nad(+) kinase | C9296_23975 | Not Available | Positive | 4768453 - 4769331 | 32583.3 |
| dna repair protein recn | C9296_23980 | Not Available | Positive | 4769417 - 4771078 | 61398.0 |
| outer membrane protein assembly factor bame | C9296_23985 | Not Available | Positive | 4771227 - 4771568 | 12302.8 |
| rnfh family protein | C9296_23990 | Not Available | Negative | 4771630 - 4771920 | 10816.1 |
| type ii toxin-antitoxin system rata family toxin | C9296_23995 | Not Available | Negative | 4771910 - 4772386 | 17686.6 |
| ssra-binding protein smpb | C9296_24000 | Not Available | Positive | 4772518 - 4773000 | 18270.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





