Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0527 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290723 bp
Thymine Count
1292403 bp
Guanine Count
1315691 bp
Cytosine Count
1315234 bp
Genome Length
5219416 bp
Protein-coding Genes
4641 genes
Non-Coding Genes
535 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | C9296_23330 | Not Available | Positive | 4661355 - 4661780 | 15986.8 |
| type vi secretion system baseplate subunit tssf | C9296_23335 | Not Available | Positive | 4661786 - 4663627 | 70805.8 |
| type vi secretion system baseplate subunit tssg | C9296_23340 | Not Available | Positive | 4663591 - 4664640 | 39103.0 |
| type vi secretion system-associated fha domain protein tagh | C9296_23345 | Not Available | Positive | 4664645 - 4665937 | 47663.5 |
| type vi secretion system lipoprotein tssj | C9296_23350 | Not Available | Positive | 4665934 - 4666458 | 19252.9 |
| type vi secretion system baseplate subunit tssk | C9296_23355 | Not Available | Positive | 4666461 - 4667807 | 49894.3 |
| dotu family type iv/vi secretion system protein | C9296_23360 | Not Available | Positive | 4667812 - 4668576 | 29487.0 |
| type vi secretion system atpase tssh | C9296_23365 | Not Available | Positive | 4668586 - 4671348 | 100324.0 |
| type vi secretion system-associated protein tago | C9296_23370 | Not Available | Positive | 4671345 - 4672088 | 26450.7 |
| type vi secretion system protein tssa | C9296_23375 | Not Available | Positive | 4672093 - 4673535 | 53880.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





