Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0527 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290723 bp
Thymine Count
1292403 bp
Guanine Count
1315691 bp
Cytosine Count
1315234 bp
Genome Length
5219416 bp
Protein-coding Genes
4641 genes
Non-Coding Genes
535 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | C9296_21645 | Not Available | Negative | 4353246 - 4354679 | 54063.1 |
| duf3987 domain-containing protein | C9296_21650 | Not Available | Negative | 4354898 - 4355095 | 7183.03 |
| alpa family transcriptional regulator | C9296_21655 | Not Available | Negative | 4355322 - 4355618 | 11102.3 |
| hypothetical protein | C9296_21670 | Not Available | Positive | 4356732 - 4358549 | 70849.3 |
| duf4102 domain-containing protein | C9296_21675 | Not Available | Negative | 4358736 - 4359938 | 45446.9 |
| ggdef domain-containing protein | C9296_21680 | Not Available | Negative | 4360217 - 4361584 | 52097.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | C9296_21685 | Not Available | Positive | 4362172 - 4364595 | 92347.1 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | C9296_21690 | Not Available | Positive | 4364604 - 4366622 | 77413.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | C9296_21695 | Not Available | Positive | 4366615 - 4367940 | 50738.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | C9296_21700 | Not Available | Positive | 4367942 - 4368355 | 16100.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





