Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0527 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290723 bp
Thymine Count
1292403 bp
Guanine Count
1315691 bp
Cytosine Count
1315234 bp
Genome Length
5219416 bp
Protein-coding Genes
4641 genes
Non-Coding Genes
535 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | C9296_21530 | Not Available | Positive | 4331317 - 4332483 | 41400.4 |
| transcriptional activator nhar | C9296_21535 | Not Available | Positive | 4332543 - 4333448 | 34293.2 |
| 30s ribosomal protein s20 | C9296_21540 | Not Available | Negative | 4333544 - 4333807 | 9684.94 |
| duf2575 domain-containing protein | C9296_21545 | Not Available | Positive | 4333910 - 4334128 | 7947.9 |
| bifunctional riboflavin kinase/fad synthetase | C9296_21550 | Not Available | Positive | 4334136 - 4335077 | 34736.4 |
| isoleucine--trna ligase | C9296_21555 | Not Available | Positive | 4335120 - 4337936 | 104374.0 |
| lipoprotein signal peptidase | C9296_21560 | Not Available | Positive | 4337936 - 4338430 | 18129.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | C9296_21565 | Not Available | Positive | 4338538 - 4338987 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C9296_21570 | Not Available | Positive | 4338989 - 4339939 | 34721.4 |
| non-specific ribonucleoside hydrolase rihc | C9296_21575 | Not Available | Positive | 4340005 - 4340919 | 32601.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





