Escherichia coli strain FWSEC0521

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0521 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. It prefers a mesophilic temperature range, with an optimal growth temperature of 37°C. FWSEC0521 has a unique biotic relationship as it is free-living, yet it is also associated with a diverse range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various others across multiple taxa, including mammals, birds, and even plants like Solanum lycopersicum. The strain is characterized by a single replicon and possesses two membranes, typical of Gram-negative bacteria. FWSEC0521 is associated with a wide array of health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The bacterium's pathogenicity in humans underscores its significance as a clinical concern, particularly in relation to foodborne infections and diseases that affect the urinary and gastrointestinal tracts. The ecological insight drawn from the host associations of FWSEC0521 suggests that this strain plays a multifaceted role in both health and disease across different organisms. Its free-living nature, combined with its ability to cause infections, indicates a complex interaction with the microbiomes of various hosts, potentially influencing both microbial diversity and disease dynamics within those ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0521

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0521
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0521 plasmid unnamed6

Gene Summary

Adenine Count

1319141 bp

Thymine Count

1324371 bp

Guanine Count

1330026 bp

Cytosine Count

1349893 bp

Genome Length

5336359 bp

Protein-coding Genes

4922 genes

Non-Coding Genes

394 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dgtpaseC9291_00010Not AvailablePositive512 - 289689608.4
5s ribosomal rnaNot AvailableNot AvailablePositive2817 - 2932Not Available
chemotaxis proteinC9291_00015Not AvailablePositive2893 - 379833851.8
patatin-like phospholipase family proteinC9291_00020Not AvailablePositive3795 - 486538283.3
cytoplasmic proteinC9291_00025Not AvailablePositive5092 - 51843444.12
duf945 domain-containing proteinC9291_00030Not AvailablePositive5205 - 602331229.4
antirestriction proteinC9291_00035Not AvailablePositive6114 - 659918137.3
dna repair protein radcC9291_00040Not AvailablePositive6615 - 709117674.4
duf987 domain-containing proteinC9291_00045Not AvailablePositive7154 - 73758411.2
type iv toxin-antitoxin system yeeu family antitoxinC9291_00050Not AvailablePositive7538 - 791213767.4

Displaying genes 371 – 380 of 5322 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total