Escherichia coli strain FWSEC0517

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0517 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. It is typically found in pairs or singles and possesses flagella, enabling mobility. This strain is mesophilic, with an optimal growth temperature of 37°C. E. coli FWSEC0517 is host-associated and has a broad range of potential hosts, including Homo sapiens (humans), various livestock such as Bos taurus (cattle) and Sus scrofa (pigs), as well as other vertebrates like Gallus gallus (chickens) and Canis lupus familiaris (dogs). Its biotic relationship is classified as free-living, indicating its ability to exist independently in the environment. This strain is notably pathogenic to humans and is associated with numerous health effects, including urinary tract infections (UTIs), gastrointestinal infections, septicemia, and neonatal meningitis. It can lead to severe conditions such as hemolytic uremic syndrome (HUS) and renal failure, among other diseases. The diverse range of hosts and significant health implications of E. coli FWSEC0517 highlight its ecological adaptability and potential public health risks. Understanding its pathogenicity and host interactions is crucial for managing the infections it causes, particularly in humans and domestic animals. This strain exemplifies the importance of monitoring E. coli in various environments to mitigate its impact on health and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0517

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0517
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0517 plasmid unnamed4

Gene Summary

Adenine Count

1252153 bp

Thymine Count

1249860 bp

Guanine Count

1273114 bp

Cytosine Count

1278761 bp

Genome Length

5062418 bp

Protein-coding Genes

4693 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC9287_25075Not AvailablePositive4994017 - 499430411038.2
lytic transglycosylaseC9287_25085Not AvailableNegative4995541 - 499614322732.6
relaxosome protein tramC9287_25090Not AvailablePositive4996473 - 499685614519.3
pas domain-containing proteinC9287_25095Not AvailablePositive4997049 - 499773826709.3
conjugal transfer relaxosome protein trayC9287_25100Not AvailablePositive4997742 - 499805312500.8
type iv conjugative transfer system pilin traaC9287_25105Not AvailablePositive4998088 - 499844112435.8
type iv conjugative transfer system protein tralC9287_25110Not AvailablePositive4998456 - 499876711960.7
type iv conjugative transfer system protein traeC9287_25115Not AvailablePositive4998789 - 499935521299.9
type-f conjugative transfer system secretin trakC9287_25120Not AvailablePositive4999342 - 500007025707.9
conjugal transfer protein trapC9287_25130Not AvailablePositive5001489 - 500207621833.3

Displaying genes 4811 – 4820 of 4880 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total