Escherichia coli strain FWSEC0517

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0517 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. It is typically found in pairs or singles and possesses flagella, enabling mobility. This strain is mesophilic, with an optimal growth temperature of 37°C. E. coli FWSEC0517 is host-associated and has a broad range of potential hosts, including Homo sapiens (humans), various livestock such as Bos taurus (cattle) and Sus scrofa (pigs), as well as other vertebrates like Gallus gallus (chickens) and Canis lupus familiaris (dogs). Its biotic relationship is classified as free-living, indicating its ability to exist independently in the environment. This strain is notably pathogenic to humans and is associated with numerous health effects, including urinary tract infections (UTIs), gastrointestinal infections, septicemia, and neonatal meningitis. It can lead to severe conditions such as hemolytic uremic syndrome (HUS) and renal failure, among other diseases. The diverse range of hosts and significant health implications of E. coli FWSEC0517 highlight its ecological adaptability and potential public health risks. Understanding its pathogenicity and host interactions is crucial for managing the infections it causes, particularly in humans and domestic animals. This strain exemplifies the importance of monitoring E. coli in various environments to mitigate its impact on health and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0517

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0517
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0517 plasmid unnamed4

Gene Summary

Adenine Count

1252153 bp

Thymine Count

1249860 bp

Guanine Count

1273114 bp

Cytosine Count

1278761 bp

Genome Length

5062418 bp

Protein-coding Genes

4693 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein piliC9287_24560Not AvailableNegative4917211 - 49174539129.12
flotillin family proteinC9287_24565Not AvailableNegative4917534 - 491922861838.4
duf1449 family proteinC9287_24570Not AvailableNegative4919255 - 491987522314.8
conjugal transfer protein tracC9287_24575Not AvailableNegative4920029 - 49201785760.88
tracC9287_24580Not AvailableNegative4920142 - 492080724960.9
transcription termination factor nusgC9287_24585Not AvailableNegative4920948 - 492158924619.8
hypothetical proteinC9287_24590Not AvailablePositive4921859 - 49221079612.95
positive regulator for repz translationC9287_24595Not AvailablePositive4922215 - 49223043329.98
incfii family plasmid replication initiator repaC9287_24600Not AvailablePositive4922301 - 492316432889.7
hypothetical proteinC9287_24605Not AvailablePositive4923214 - 49234869889.09

Displaying genes 4731 – 4740 of 4880 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total