Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0517 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252153 bp
Thymine Count
1249860 bp
Guanine Count
1273114 bp
Cytosine Count
1278761 bp
Genome Length
5062418 bp
Protein-coding Genes
4693 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin j25 efflux abc transporter yoji | C9287_12540 | Not Available | Negative | 2611497 - 2613140 | 61572.4 |
| dna oxidative demethylase alkb | C9287_12545 | Not Available | Negative | 2613216 - 2613866 | 24069.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | C9287_12550 | Not Available | Negative | 2613866 - 2614930 | 39336.9 |
| fad:protein fmn transferase apbe | C9287_12555 | Not Available | Negative | 2615004 - 2616059 | 38583.0 |
| porin ompc | C9287_12560 | Not Available | Negative | 2616171 - 2617262 | 40097.0 |
| phosphotransferase rcsd | C9287_12565 | Not Available | Positive | 2618000 - 2620672 | 100340.0 |
| dna-binding response regulator | C9287_12570 | Not Available | Positive | 2620689 - 2621339 | 23672.0 |
| hybrid sensor histidine kinase/response regulator | C9287_12575 | Not Available | Negative | 2621539 - 2624388 | 106513.0 |
| duf2135 domain-containing protein | C9287_12580 | Not Available | Negative | 2624663 - 2625439 | 28291.2 |
| duf2300 domain-containing protein | C9287_12585 | Not Available | Negative | 2625444 - 2627093 | 61479.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





