Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0517 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252153 bp
Thymine Count
1249860 bp
Guanine Count
1273114 bp
Cytosine Count
1278761 bp
Genome Length
5062418 bp
Protein-coding Genes
4693 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein hoke | C9287_12280 | Not Available | Negative | 2556746 - 2556898 | 5564.05 |
| hypothetical protein | C9287_12285 | Not Available | Positive | 2556897 - 2557136 | 8707.91 |
| glutamate--cysteine ligase | C9287_12290 | Not Available | Positive | 2557340 - 2558458 | 41679.6 |
| duf1158 domain-containing protein | C9287_12295 | Not Available | Positive | 2558524 - 2558772 | 9434.09 |
| mmcq/yjbr family dna-binding protein | C9287_12300 | Not Available | Positive | 2558837 - 2559205 | 14090.2 |
| oxygen-insensitive nad(p)h nitroreductase | C9287_12305 | Not Available | Positive | 2559299 - 2559952 | 23860.3 |
| mechanosensitive ion channel family protein | C9287_12310 | Not Available | Positive | 2560060 - 2561307 | 46619.5 |
| aromatic amino acid transporter arop | C9287_12315 | Not Available | Negative | 2561375 - 2562751 | 50648.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | C9287_12320 | Not Available | Negative | 2562853 - 2565996 | 114714.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | C9287_12325 | Not Available | Negative | 2566008 - 2567231 | 44435.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





