Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9215_25520 | Not Available | Negative | 5037105 - 5037313 | 7688.3 |
| phage gp6-like head-tail connector protein | C9215_25525 | Not Available | Negative | 5037323 - 5037649 | 12127.8 |
| phage portal protein | C9215_25530 | Not Available | Negative | 5037652 - 5038869 | 44269.2 |
| exonuclease | C9215_25535 | Not Available | Negative | 5038960 - 5040783 | 67891.0 |
| shiga toxin stx1 subunit a | C9215_25545 | Not Available | Positive | 5041081 - 5042028 | 34815.8 |
| shiga toxin stx1 subunit b | C9215_25550 | Not Available | Positive | 5042038 - 5042307 | 9743.67 |
| rhs repeat protein | C9215_25560 | Not Available | Positive | 5044293 - 5045816 | 55057.7 |
| phage portal protein | C9215_25565 | Not Available | Negative | 5045817 - 5047167 | 50310.7 |
| hypothetical protein | C9215_25570 | Not Available | Negative | 5047113 - 5047274 | 5875.99 |
| phage terminase large subunit family protein | C9215_25575 | Not Available | Negative | 5047316 - 5047988 | 25592.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





