Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9215_25075 | Not Available | Positive | 4988014 - 4988328 | 12118.5 |
| Trna-met | Not Available | Not Available | Positive | 4988331 - 4988406 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4988416 - 4988492 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4988506 - 4988582 | Not Available |
| shiga toxin stx2 subunit a | C9215_25095 | Not Available | Positive | 4988673 - 4989632 | 35716.5 |
| shiga toxin stx2 subunit b | C9215_25100 | Not Available | Positive | 4989644 - 4989913 | 9874.75 |
| duf1737 domain-containing protein | C9215_25110 | Not Available | Positive | 4990400 - 4991477 | 38746.6 |
| superoxide dismutase | C9215_25115 | Not Available | Negative | 4991478 - 4991550 | 2726.32 |
| host specificity protein j | C9215_25120 | Not Available | Positive | 4991552 - 4994615 | 111516.0 |
| rhs repeat protein | C9215_25125 | Not Available | Positive | 4994616 - 4995223 | 22812.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





