Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1315094 bp
Thymine Count
1313008 bp
Guanine Count
1324057 bp
Cytosine Count
1334469 bp
Genome Length
5295878 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
358 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lexa family transcriptional regulator | C9215_24960 | Not Available | Negative | 4973366 - 4974013 | 23246.6 |
| xre family transcriptional regulator | C9215_24965 | Not Available | Positive | 4974122 - 4974340 | 7832.55 |
| hypothetical protein | C9215_24970 | Not Available | Positive | 4974455 - 4974561 | 3920.68 |
| rusa family crossover junction endodeoxyribonuclease | C9215_24975 | Not Available | Positive | 4974562 - 4974856 | 10795.1 |
| antitermination protein | C9215_24980 | Not Available | Positive | 4974846 - 4975217 | 13924.2 |
| cpbp family intramembrane metalloprotease | C9215_24985 | Not Available | Positive | 4975369 - 4976187 | 30881.4 |
| hypothetical protein | C9215_24990 | Not Available | Positive | 4976474 - 4976713 | 8804.6 |
| helix-turn-helix domain-containing protein | C9215_24995 | Not Available | Positive | 4976808 - 4977521 | 26832.1 |
| Trna-met | Not Available | Not Available | Positive | 4977550 - 4977625 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4977723 - 4977799 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





